- Mahbouba B, Nadir B, Nadia Y, Abdelhamid D. Phenotypic and molecular characterization of plant
growth promoting Rhizobacteria isolated from the rhizosphere of wheat (Triticum durum Desf.) in Algeria. Afr J Microbiol Res. 2013; 7(23): 2893-2904. 2. Bashan Y, De-Bashan LE. How the plant growth-promoting bacterium Azospirillum promotes plant
growth—a critical assessment. In Adv Agron. 2010; 108: 77-136. Academic Press. 3. Eleni V, Anastasia V, Maria D, Iordanis C, Anastasia T, Katinakis P. Phylogenetic analysis of Azospirillum species isolated from the rhizosphere of field‐grown wheat based on genetic and phenotypic features. Mol Microbial Ecol Rhizosphere. 2013; 1: 203- 210. 4. Saikia SP, Bora D, Goswami A, Mudoi KD, Gogoi A. A review on the role of Azospirillum in the yield improvement of non leguminous crops. Afr J Microbiol Res. 2012; 6(6): 1085-1102. 5. Lin SY, Shen FT, Young CC. Rapid detection and identification of the free-living nitrogen fixing genus Azospirillum by 16S rRNA-gene-targeted genus-specific primers. Antonie Leeuwenhoek. 2011; 99(4): 837-844. 6. Lin SY, Liu YC, Hameed A, Hsu YH, Lai WA, Shen FT, Young CC. Azospirillum fermentarium sp. nov., a nitrogen-fixing species isolated from a fermenter. Int J Syst Evol Microbiol. 2013; 63(10): 3762-3768. 7. Zhou S, Han L, Wang Y, Yang G, Zhuang L, Hu P. Azospirillum humicireducens sp. nov., a nitrogenfixing bacterium isolated from a microbial fuel cell. Int J Syst Evol Microbiol. 2013; 63(7): 2618-2624. 8. Wisniewski-Dye F, Borziak K, Khalsa-Moyers G, Alexandre G, Sukharnikov LO, Wuichet K, Hurst GB, McDonald WH, Robertson JS, Barbe V, Calteau A. Azospirillum genomes reveal transition of bacteria from aquatic to terrestrial environments. PLoS Genet. 2011; 7(12): e1002430. 9. Kaneko T, Minamisawa K, Isawa T, Nakatsukasa H, Mitsui H, Kawaharada Y, Nakamura Y, Watanabe A, Kawashima K, Ono A, Shimizu Y. Complete genomic structure of the cultivated rice endophyte Azospirillum sp. B510. DNA Res. 2010; 17(1): 37-50. 10. Sant'Anna FH, Almeida LG, Cecagno R, Reolon LA, Siqueira FM, Machado MR, Vasconcelos AT, Schrank IS. Genomic insights into the versatility of the plant growth-promoting bacterium Azospirillum amazonense. BMC genomics. 2011; 12(1): 409. 11. dos Anjos Borges LG, Dalla Vechia V, Corção G. Characterisation and genetic diversity via REP-PCR of Escherichia coli isolates from polluted waters in southern Brazil. FEMS Microbiol Ecol. 2003; 45(2): 173-180. 12. Najafi Pour G, Taghavi SM. Comparison of P. syringae pv. syringae from different hosts based on pathogenicity and BOX-PCR in Iran. J Agr Ssi Tech-Iran. 2011; 13(3): 431-442. 13. Vicente JG, Roberts SJ. Discrimination of Pseudomonas syringae isolates from sweet and wild cherry using rep-PCR. Eur J Plant Pathol. 2007; 117(4): 383-392. 14. Adiguzel G, Atasever M. Phenotypic and genotypic characterization of lactic acid bacteria isolated from Turkish dry fermented sausage. Rom Biotechnol Lett. 2009; 14(1): 4130-4138. 15. Versalovic J, Koeuth T, Lupski R. Distribution of repetitive DNA sequences in eubacteria and application to finerpriting of bacterial enomes. Nucleic Acids Res. 1991; 19(24): 6823-6831. 16. Rebecca LH, Zothansanga Singh BP, Gurusubramanian G, Senthil NK. DNA finger printing of
Bacillus thuringiensis based on repetitive DNA sequences using ERIC-PCR. Sci Vis. 2011; 11(3): 147-154. 17. Louws FJ, Rademaker JL, De Bruijn FJ. The three Ds of PCR-based genomic analysis of phytobacteria: diversity, detection, and disease diagnosis. Annu Rev Phytopathol. 1999; 37(1): 81-125. 18. Ishii S, Sadowsky MJ. Applications of the rep‐PCR DNA fingerprinting technique to study microbial diversity, ecology and evolution. Environ Microbiol. 2009; 11(4): 733-740. 19. Yadegar A, Alebouyeh M, Lawson AJ, Mirzaei T, Mojarad EN, Zali MR. Differentiation of non-pylori Helicobacter species based on PCR–restriction fragment length polymorphism of the 23S rRNA gene. World J Microbiol Biotechnol. 2014; 30(6): 1909-1917. 20. Patton TG, Katz S, Sobieski RJ, Crupper SS. Genotyping of clinical Serratia marcescens isolates: a comparison of PCR-based methods. FEMS Microbiol Lett. 2001; 194(1): 19-25. 21. Sabat AJ, Budimir A, Nashev D, Sá-Leão R, Van Dijl JM, Laurent F, Grundmann H, Friedrich AW, ESCMID Study Group of Epidemiological Markers (ESGEM. Overview of molecular typing methods for outbreak detection and epidemiological surveillance. Euro Surveill. 2013; 18(4): 20380. 22. Kanimozhi K, Panneerselvam A. Studies on isolation and nitrogen fixation ability of Azospirillum spp. isolated from Thanjavur district. Der Chemica Sinica. 2010; 1(3): 138-145. 23. Radif HM, Hassan SS. Detection of hydrolytic enzymes produced by Azospirillum brasiliense isolated from root soil. World J Exp Biosci. 2014; 2: 36-40. 24. Garibyan L, Avashia N. Research techniques made simple: polymerase chain reaction (PCR). J Invest Dermatol. 2013; 133(3): e6. 25. Mao DP, Zhou Q, Chen CY, Quan ZX. Coverage evaluation of universal bacterial primers using the metagenomic datasets. BMC Microbiol. 2012; 12(1): 66. 26. Shime–Hattori A, Kobayashi S, Ikeda S, Asano R, Shime H, Shinano T. A rapid and simple PCR method for identifying isolates of the genus Azospirillum within populations of rhizosphere bacteria. J Appl Microbiol. 2011; 111(4): 915-924. 27. Senthilraj R, Prasad GS, Janakiraman K. Sequence-based identification of microbial contaminants in non-parenteral products. Braz J Pharm Sci. 2016; 52(2): 329-336. 28. Mazinani Z, Asgharzadeh A. Genetic diversity of Azotobacter strains isolated from soils by amplified ribosomal DNA restriction analysis. Cytol Genet. 2014; 48(5): 293-301. 29. Lu G, Moriyama EN. Vector NTI, a balanced all-in-one sequence analysis suite. Brief Bioinform. 2004; 5(4): 378-388. 30. Mamaril JC, Trinidad LC. Use of rep-PCR to fingerprint the genome of Azospirillum spp. In Molecular Microbial Ecology of the Soil. Springer, Dordrecht. 1998; pp. 155-160. 31. Rohlf JF. NTSYSpc, Numerical taxonomy and multivariate analysis system, version 2.1 (© 2002 by Applied Biostatistics, Inc). Exeter Software. New York: Setauket. 2000. دنیای میکروبها، سال دوازدهم شماره چهارم زمستان .1389انگشت نگاری ژنومی گونه های مختلف آزوسپیریلوم جدا شده از مزارع گندم و ذرت با روش ..Rep-PCRشهابی و همکاران 375 32. Ayyaz K, Zaheer A, Rasul G, Mirza MS. Isolation and identification by 16S rRNA sequence analysis of plant growth-promoting azospirilla from the rhizosphere of wheat. Braz J Microbiol. 2016; 47(3): 542-550. 33. Bashan Y, Holguin G, De-Bashan LE. Azospirillum-plant relationships: physiological, molecular, agricultural, and environmental advances (1997-2003). Can J Microbiol. 2004; 50(8): 521-577. 34. Ilyas N, Bano A. Azospirillum strains isolated from roots and rhizosphere soil of wheat (Triticum aestivum L.) grown under different soil moisture conditions. Biol Fertil Soils. 2010; 46(4): 393-406. 35. Tarrand JJ, Krieg NR, Döbereiner J. A taxonomic study of the Spirillum lipoferum group, with descriptions of a new genus, Azospirillum gen. nov. and two species, Azospirillum lipoferum (Beijerinck) comb. nov. and Azospirillum brasilense sp. nov. Can J Microbiol. 1978; 24(8): 967-980. 36. Mehnaz S, Weselowski B, Lazarovits G. Azospirillum zeae sp. nov., a diazotrophic bacterium isolated from rhizosphere soil of Zea mays. Int J Syst Evol Microbiol. 2007; 57(12): 2805-2809. 37. Doleans-Jordheim A, Cournoyer B, Bergeron E, Croize J, Salord H, Andre J, Mazoyer MA, Renaud FN, Freney J. Reliability of Pseudomonas aeruginosa semi-automated rep-PCR genotyping in various epidemiological situations. Eur J Clin Microbiol Infect Dis. 2009; 28(9): 1105-1111. 38. Ishii S, Ohno H, Tsuboi M, Otsuka S, Senoo K. Identification and isolation of active N2O reducers in rice paddy soil. ISME J. 2011; 5(12): 1936. 39. Tejera NL, Lluch C, Martinez-Toledo MV, Gonzalez-Lopez J. Isolation and characterization of Azotobacter and Azospirillum strains from the sugarcane rhizosphere. Plant Soil. 2005; 270(1): 223-232.
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